I have an imaging mass cytrometry dataset which I’m trying to analyse using ICY and Ilastik. So far I have used ICY for noise reduction, 2x scaling and random cropping ( more information about these steps in this link)
I’m trying to use Ilastik now for pixel classification but when I load the .tiff files produced with the ICY plugin random-crops, Ilastik just remain inactive for hours (picture and tiff sample attached).
Any idea of where the problem is?
ICYcrops.zip (3.4 MB)