I’m facing an issue with loading/conversion of my data.
I have some (2612) individual tif slices from EM, total dataset is around 60Go, so I would like to convert it to h5 so please ilastik
Loading the dataset result in a black image :
BUT if I use a subset of the dataset (11 slices) it works well …
Data Range, Normalize and Display Mode are the same…
BTW, I also tried to convert the image to h5 anyway and re-open it in ilastik, got the same black image.
Just to reassure you, the idea is not to do the training on this dataset.
Rather doing the training on some 3D-crops and apply it later on the large stack.
Thank you in advance for your help,