Thanks for the reply guys, the error message is:
There was a problem running the image analysis. Sorry, it is unclear what the problem is. It would be wise to close the entire CellProfiler program in case something strange has happened to the settings. The output file may be unreliable as well. Matlab says the error is: Undefined function or method ‘IdentifySecPropagateSubfunction’ for input arguments of type ‘double’. in the IdentifySecondary module, which is module #46 in the pipeline.
IdentifySecondary in /Applications/CellProfiler/Modules/IdentifySecondary.m (376)
AnalyzeImagesButton_Callback in /Applications/CellProfiler/CellProfiler.m (4298)
gui_mainfcn in /Applications/CellProfiler/CellProfiler.m (6055)
CellProfiler in /Applications/CellProfiler/CellProfiler.m (55)
Also, I do have CP 2.0 on my computer, but for this specific task, I’m continuing that was started using CP 1.0, and I’d like to finish it using the same pipeline.
David, I’ll try to compile it, and see how it goes - Thanks!