I’m trying to modify the NeuronJ plugin from @emeijering (https://imagescience.org/meijering/software/neuronj/, code is at https://github.com/imagescience/NeuronJ) to solve the issue I filed a while ago regarding the order of Next/Previous image opening with the keyboard shortcuts being botched on APFS-formatted drives (i.e. Macs running the last 2-3 versions of OSX). More on the issue here:
Solving this is (likely) just adding a sorting step to the array listing the image file names in NeuronJ code, so I figured I could do it myself to streamline our workflow (people from our lab are doing quantification at home right now with the Covid lockdown…). I have downloaded the whole neuronJ repository as a zip, modified the NeuronJ_.java file to add the sorting step (import java.util.Arrays; at line 84 and Arrays.sort(NJ.workimages, String.CASE_INSENSITIVE_ORDER); at line 637).