I have captured a large number of images as .oif files (from an Olympus confocal microscope). I tried to load them into CellProfiler but it didn’t recognize the files, it would only recognize the files when I converted a few to tif. I’m using the Speckle couting pipeline and it worked very well with the tif files.
Is there a way to load .oif files into CellProfiler, or have CellProfiler recognize the .oif files without having to convert them into a different format?
Would be great if you could help me with this!
PS. In LoadImages, .oif doesn’t show up as one of the options, I could only find tif, tiff, flex, zvi under the “File type to be loaded”.