I am a new user of ImageJ. My micro-CT image stacks are about soil aggregates. I am trying to build my CT slices to 3D and I seemingly already completed the 3D Viewer step. Now I have a bottleneck, I don’t Kwon how to extract the subvolume of interest, and this subvolume has a specific size, and it’s a cube (e.g. 500×500×500 voxel). What I want is like from Figure 1 to Figure 2.
How can I solve this problem? Or my order is a fault? I need to extract the volume of a particular size first, and then build a 3D structure?
(SORRY, my English is bad, I hope this won’t make it hard for you to understand.)
Thanks in advance!