I’m a newbie on ImageJ. Please, help how to count number of vascular trees in ROI. Thanks.
Welcome to the Forum!
So to start… What do you consider a ‘vascular tree’? I am not sure myself - this is not my field - so can you indicate exactly what you want to count?
That would help us help you.
Inside green line (ROI) we’ll see white (hyperehoic) lines. There are branches of vascular tree. I want to count number, how many these white branches.
I have many images like this.
I’ll be appricate if you help me.
Well - if it’s the branching you want to count… you can look at using the Analyze Skeleton Fiji plugin - that might do what you need here.
Thanks for helping. I’ll try
If you have more questions… be sure to post here. Sorry I don’t have time to go through with your dataset myself… but I do hope this helps!