Sample image and/or code
This is a large photo of several photos stitched together in an MIA way, it is a panoramic view of the muscle after being stained with HE, I would like to calculate its full number of muscle fibers (the ones in red circles) but it is almost impossible to count them manually because the number is so huge (I have about 50 of these photos!)
Hi all, I’m new to cell profiler. I want to use it to calculate the total number of myofibers after HE staining, but I don’t know how I should go about writing it? I found some pipelines, but they all seem to be out of date. If anyone knows and can answer, I’d appreciate it!!!