I have posted the same question somewhere else: How do I save ROIs into an OME.TIFF file?
I want to keep many ROIs stored in the Overlay of an image in ImageJ into an OME.TIF file.
The Bio-Formats Exporter has “Export ROIs” option in the dialog, so I thought this should do the job.
I used the boats.gif example image of ImageJ. Put a few TextRois into Overlay, and saved it in uncompressed OME.TIF with the “Export ROIs” option. To my surprise, I cannot find any ROIs either in Overlay or ROI manager from the saved OME.TIF file.
I also tried using Image > Overlay > To ROI Manager and then Save As… > OME.TIF with “Export ROIs”. This doesn’t work either.
Now I really wonder if I can save ROIs at all with the OME.TIF format. Actually, I thought once I managed to do it. Please tell me if I’m doing something wrong.
BTW, I can save ROIs in Overlay with standard TIFF format.