I am using the 2.1.0 (rev eecd0b4) on a computing cluster and unfortunately I can’t drag and drop the folder into the input panel.
So I am trying the alternative way which is to use “LoadData” module.
For my setup, image I have the following images in the folder: /home/me/images
where I want to call the “_c1” file DNA and “_c2” file FOCI
I have generated a file called 'imagelist.csv" with the following contents:
When I do “Press to view CSV file content” button, I see that CP properly loads this file.
I am not able to figure out what the difference is between “Input data file location” and “Base image location”, so in both the cases I have specified the same folder “/home/me/images”
I uncheck the “group images by metadata” .
The next module in my pipeline is “IdentifyPrimaryObjects” in which
in the “Select the input image” I have entered “DNA”
There is a yet another “IdentifyPrimaryObjects” module in which in the “Select the input image” I have entered “FOCI”
However, I get the error (when I hover over “IdentifyPrimaryObject” as “No prior instances of imagegroup were defined”
So I go back to the “LoadData” module and check the 'group images by metadata", however, the “Select metadata fields for grouping” is empty and I am unable to type anything in it.
Can you please tell me what I am doing wrong?