I’m trying to reproduce the results shown in figure 4 of the Nature methods paper on DeepLabCut (http://catniplab.github.io/journalclub/JCpapers/Mathis_markerless_defined_deeplearning.pdf), but for freely moving rats. I have a network trained on a single rat and am trying to make predictions based for multiple animals from this network. But I not able to do this without applying different analysis methods to the scoremaps and having to build this into the package. Could you share your code on how you did this for the mice in the figure?
I am using DeepLabCut 2.0 at the moment.
Thank you in advance for your help! I look forward to hearing from you.