I am trying to select witch images I will analyze in CellProfiler by using the FlagImage Module. I have a column in my metadata file that contains numeric values (0 for those images I what to skip and 1 for those I want to run). I select to Skip the image if it is flagged and choose a minimum value (0.5, but 1 also does not work) to flag the image if it is below. Flag is based in Whole-image measurement.
I get the error message below. It asks for a a float, but even if I use 0.1 and 1.1 (instead of 0 and 1) in the column in my Metadata file, the error keeps happening. I am using CellProfiler Version: 2.2.0rc2 in a 64bit Windows 10 machine.
Is there an alternative way to do this ?
Thank you very much!!
Traceback (most recent call last):
File “cellprofiler\gui\pipelinecontroller.pyc”, line 2826, in do_step
File “cellprofiler\pipeline.pyc”, line 2067, in run_module
File “cellprofiler\modules\flagimage.pyc”, line 364, in run
File “cellprofiler\modules\flagimage.pyc”, line 478, in run_flag
File “cellprofiler\modules\flagimage.pyc”, line 514, in eval_measurement
TypeError: a float is required