Filter Based on Relative Intensity?

cellprofiler

#1

Hey there,

Is there any way of filtering objects based on relative intensity? For example, I would like to measure the intensity of objects and filter out the most and least intense x%. Is there a way of measuring the mean intensity of the objects in an image and then filtering objects either by trimming away the top and bottom x% or by filtering those that deviate by x-fold from the mean?

Thanks,

JT


#2

Hi JT,

Unfortunately, there is no means to take an aggregate object measurement (such as the overall mean) and apply it to a per-object measurement at this point. However, this is a useful feature that we can place on our list of items to add to the next release.

Regards,
-Mark