I used a published pipeline to extract features from tissue images. The output has over 800 features with the names very hard to understand for a biology student as me. So I wander where can I find more about the specific difinition of the feature name such as “Threshold_FinalThreshold_Identifyeosinprimarycytoplasm, Zernike and so on”. I’ve checked the manuals and it is mainly about how to use the software.
Welcome! You are not the first to be overwhelmed by the features and wondering what they represent. Take a look here: https://github.com/carpenterlab/2016_bray_natprot/wiki/What-do-Cell-Painting-features-mean%3F
Thank you so much. This is exactly what I’m looking for.