Hi! I am a new user of CellProfiler and ilastik. I am learning to integrate ilastik pixel classification into my CP pipeline for better segmentation. I have installed ilastik 1.3.2 and CellProfiler (v1.3.5) in my computer with windows 7. I downloaded predict.py (https://github.com/CellProfiler/CellProfiler-plugins/blob/master/predict.py) and saved it in a default folder for CP plugins. After I restarted CellProfiler, we could not see it in ‘add modules’ at all. There should be a module called ‘predict’, right? Have anyone else had the same problem? Should the plugin work for all cellprofiler versions? thanks for all your responses.
The installation has been done. Thanks to my friend.
Glad to hear it! Can you report what helped your problem, in case others face the same issue?
My ITs friend helped me for the installation. Please see his comment: