Failed to install ilastik plugin for CellProfiler 3.1.5

cellprofiler
plugin
#1

Hi! I am a new user of CellProfiler and ilastik. I am learning to integrate ilastik pixel classification into my CP pipeline for better segmentation. I have installed ilastik 1.3.2 and CellProfiler (v1.3.5) in my computer with windows 7. I downloaded predict.py (https://github.com/CellProfiler/CellProfiler-plugins/blob/master/predict.py) and saved it in a default folder for CP plugins. After I restarted CellProfiler, we could not see it in ‘add modules’ at all. There should be a module called ‘predict’, right? Have anyone else had the same problem? Should the plugin work for all cellprofiler versions? thanks for all your responses.

#2

The installation has been done. Thanks to my friend.

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#3

Glad to hear it! Can you report what helped your problem, in case others face the same issue?

#4

My ITs friend helped me for the installation. Please see his comment:

https://github.com/jubilee2/CellProfiler-plugins/tree/jubilee2-patch-1

Thanks Anne!

Tim (yhsu822)

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