I’m using the following version of Fiji (ImageJ):
I have five images, which I’ve stacked: misaligned.tif (881.2 KB). I used SIFT to get an acceptable alignment of the features in each image: aligned_SIFT1.tif (881.0 KB). The settings I used for the SIFT:
- Gaussian blur: 0.5
- Max alignment error: 10px
- Expected transformation: translation
- Interpolate (checked)
- all other settings were set at their default
The output log of the SIFT: output SIFT1.txt (507 Bytes).
Is there a plugin or macro I can use to extract the xy translation for each image? Thanks in advance!