Exporting .nd2 Files




Is it possible to export images as .nd2 files from Fiji? I have a very large .nd2 file that I want to split into multiple smaller files. I know how to create stacks of the images I want, but I have not found a way to export them as .nd2. Is there a way to do this?


Exporting .nd2 Files

Hi @npiscopo,

As far as I know, Fiji cannot export ND2 files. Neither of the methods for reading proprietary formats, Bio-Formats or SCIFIO, seems to support ND2 export.

Can I ask what your next step is, that requires the ND2 format? Is it possible you could import your cropped stacks into into Nikon Elements as a TIFF?

Hope this helps.