my pipeline identifies several objects: nuclei, cells to get the cytoplasm (cells-nuclei) and speckles, which are related to the cytoplasm.
In the ExportToSpreadsheet module I now can choose which data to export and as can be seen in the screenshot I attached, I’ ve chosen Nuclei, Cytoplasm and Speckles.
My question is, if there is a difference in “Adding another data set” or “Press to select measurements”, in which you also can choose the items to export?
In the end I want to distinguish between cells with and without (or at least less) speckles. Therefore, I think it might be useful to export as much data about them as possible, but not to increase the time for analyzing images too much - one 384 well plate takes 6 days already.
I’m happy about any suggestions,
thanks in advance