Export pose data in .json format


Is there a way to export pose data in .json format instead of .csv or .h5?



You’re welcome to do so, namely in this function is where csv and h5’s are saved, so you could modify the code to save in another format: https://github.com/AlexEMG/DeepLabCut/blob/ca93b3e7a69c674abb31bfaa812cb38940a5d598/deeplabcut/pose_estimation_tensorflow/predict_videos.py

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That should be straighforward, as the h5/csv files internally are pandas arrays and you can just export json: https://pandas.pydata.org/pandas-docs/stable/reference/api/pandas.DataFrame.to_json.html

So just read it via Dataframe = pd.read_hdf(dataname,'df_with_missing') and then export it…