Export measurements from Image Math module

cellprofiler

#1

Hi,

I have been trying to export the measurements i’m getting in the ImageMath module by subtracting to images. Where do I find these in the export to spreadsheet tree? The intensity measures I can select (mean, total intensity, etc) are all from the original images (before the subtraction)

Cheers


#2

I might be mistaken, but I thought ImageMath only produces an image as output. I don’t think it produces any intensity measurements.

You would want to add a MeasureImageIntensity module after ImageMath in order to measure intensity values.

Does that solve the problem?


#3

Yes of course. Thank you @Anne_Carpenter