Hi! I have a large image that I can only open in Qupath (it is too large to open in fiji). I’ve been able to export a small region to Ilastik which I am using to train a pixel classifier. Is there a way to then export this trained pixel classifier to use in Qupath? Or apply it to an image in Qupath? I’m new to both softwares.
You can’t export an ilastik pixel classifier for QuPath, but QuPath has a pixel classifier of its own: Pixel classification — QuPath 0.2.3 documentation