I was wondering whether it is possible to export the volume which was created in Fiji/ImageJ with the PlugIn 3D Viewer into another formate so that I can open it in the 3D Slicer.
I´m doing this because the 3D Slicer doesn´t threshold the image stack like it is possible with Fiji inside the 3D viewer (Adjust threshold)…
Therefore I need to convert the volume in an .nrrd file or vtk file. Does anyone has experience in this area?
I would be very pleased about any suggestions!
What do you mean by 3D Slicer? Are you referring to this software:
yes exactly the Slicer for example 4.8.1