I’m sorry if this is an obvious question, but when I download and untar the linux release of qupath 0.2.0-m12 (or m11) releases the app itself is missing in the bin folder. I can find the exe in the 0.2.0-m3 release though.
Are these latest release meant to be built locally?
If so, it should work for you when running from the terminal. I’m not sure what exactly changed that has made that necessary (possibly an Ubuntu or Java update – I didn’t intentionally change anything in the build process).