Every of all objects’ intensity




We use the CellProfiler program to analysis the intensity of GFP’s expression in chicken primary cell. We are happy to see that the measure object intensity module can measure some intensity. But we want to get every of all objects’ intensity in the image, e.g. there are 135 nuclei and cells in my image, we want to know every intensity of 135 nuclei and cells, or not mean intensity.

Thanks for your help,


Hi Chenna,

CellProfiler records the individual intensity of all nuclei (135 measurements). To get this data, go to Data Tools -> ExportData and choose the OUT.mat file created from your analysis. You will then be able to export the individual measurements in to an excel compatible format.

Let me know if you have any trouble!



Hi Mike,

I’ve already get every number that I want to.

Thanks, ChenNa