Hello, I am a newcomer to cell profiler. My job is to do deep learning image processing. I have a problem now. I need to label cell images and then use deep learning to train, but some cell images are closely distributed. I can’t label them one by one, so my idea is that before I mark, I split the image and then mark it. I tried to split by skimage, but the effect is not very good. Does the cell profiler have corresponding pipelines that can directly segment the cell edge on the original image??
My original picture is like this:
I want to automatically segment the edge between each cell on the original image. Can the cell profiler do it? If you can please tell me, thank you. If not, is there any other code method that can be done?