Double Click doesn't work for ".cppipe" and ""cpproj" files

cellprofiler

#1

Hello,

I have problem when double clicking saved or exported “.cppipe” and "“cpproj” files. When I double click, cellprofiler will open but the pipeline will not load. I then have to manually load it, but I would like it to load when I double click.

Any thoughts?


Error loading pipeline file
#2

I should say that I am using Cellprofiler on Mac


#3

Hello,

Unfortunately this the way that you have to do which is unavoidable. Open the cellprofiler and drag your .cppipe or cpproj to CellProfiler GUI.

Hamdah


#4

Thank you for your help!

Is there any way to open a pipeline through the terminal or through a bash file?


#5

Just want to bump the follow up about opening a pipeline through terminal or bash file?


#6

Hi,

Yes, you can run CellProfiler from the command line- a (I’m afraid slightly outdated, but the only major thing that has changed is the discontinuation of the -b flag) guide is available on our wiki.