Is there a plausible reason why the number of rows in the _Per_Cell table and the _Per_Cytoplasm table could be higher than the number of rows in the _Per_Nuclei table?
I have a project (CDP2) where 15 batches of images were processed, presumably with the same pipeline. For 13 of the batches, all three per-object tables (…_Per_Cells, …_Per_Cytoplasm, …_Per_Nuclei) have the same number of rows, but for two of them, they are different:
week3: 7,891,608 nuclei, 8,023,715 cells, 7,987,520 cytoplasms
week4: 5,550,908 nuclei, 5,550,458 cells, 5,550,892 cytoplasms
Should I assume that something went wrong and that these weeks will have to be reanalyzed?