I was wondering what the best method would be for CP to ignore the four corners of my images. The images I input in are images that have the well that we’re looking at and black space surrounding it. In my pipeline, I’ve been using a Crop module with an ellipse function basing the said ellipse off the center and creating a circle to signify the well, but I’ve recently run into some problems with a different set of images where that center was shifted.
Is there any module that can apply a crop that can ignore the black space from the IdentifyPrimObjects module without me having to input values for manual cropping?
I’ve attached my pipeline and an example image on Google Drive below. Thanks much!