CP3: Log normalized gives black image

cellprofiler
imagecontrast
cp3

#1

Using image contrast = log normalized does not seem to work for 16BPP images in CP3. It only shows a black image. Try e.g. the attached image from BBBC022.


#2

Uhm… works for me, can you re-check


#3

Hi! I’m also having trouble with the log normalized function in CP3.0, it doesn’t increase the intensities as much as previous versions of CP. I’m using mac OS X El Capitan Version 10.11.6.


#4

Made a GitHub issue, so that hopefully the SWEs can get into this and sort it out! Feel free to check it out/weigh in on it (they may want some example images that show the behavior and follow up questions).