Combining Images in Cell Profiler


How do I combine the corrected blue and green images into one image?


Hi Natasha,

You can use the GrayToColor module to combine up to three images into a color images, by assigning them to any of the red, green or blue channels.


Hi Mbray,

How can I use CellProfiler or ImageJ combine two grayscale images into 1 grayscale image? I want to merge them into 1 channel , not merge channels function in ImageJ, thank you.

Hi @minghlijiyi,

You can achieve this by using the ImageMath module to add the greyscale images together.