I have a QuPath script finding cells in Channel 1 and cells in Channel 2 using the cell detection. Result is something like here (sorry I don’t have any real data with me currently):
Is there a way to classify if the cells in C1 are overlapping the ones in C2 ? And calculate how much is overlapping ?
Like for example the black one on the left would be positive and the black one on the right negative ?
Thanks a lot.