Dear Cell Profiler team,
I hope this email finds you well. I wondered if I could ask for your help with something?
I have a CellProfiler3 pipeline that tries to measure object intensities and object size/shape features in 3-D. The intensity measurements run just fine, but whenever I try to measure size and shape, the pipeline hangs.
A copy of my files and pipeline can be found here:
At the current time, the pipeline is loading objects from ‘outside’ via ConvertImageToObjects. However, the problem still occurs if the segmentation is carried out internally as part of the pipeline(?)
Thanks for all you do + for the help,