I updated my existing pipelines from CP 2.0 to the newest version (CP 2.1) - change every “loadImage” module to the new Images/Metadata/… section.
Everything is running smoothly under GUI, when I however tried to run it headless, CP does not do anything - starts and stops.
The same pipeline with the old loading method is working perfectly.
I run it on Win7 x64 with command:
"C:\Program Files\CellProfiler\CellProfiler.exe" -c -i C:\Users\user\Test1 -o C:\Users\user\Test1_out -p C:\Users\user\pipeline_test.cppipe
The output is:
Pipeline saved with...
stopping worker thread 0
stopping worker thread 8
It seems that CP does not load any image.
Is it possible to run CP2.1 without GUI, using the new loading approach or should I just stick with the old method?
I upload an example of my pipeline (but as i said - it’s working under GUI - so i guess it is correct)
I could not find the answer in manual or somewhere in the forum.
Thanks for help!
pipeline_test.cppipe (7.79 KB)