I have been using the plugin "Cell counter" and am running into major problems.
After I reopen the original image, I launch the Cell Counter plugin but when I try to load the cell marker xml file saved from a previous session using the "Load Markers" function, ImageJ completely freezes. I have to force quit with Windows Task Manager in order to do anything else.
I have made sure that the image filename embedded in the xml file is the exact same name as the original image that I opened first. What is weird that this doesn't happen in all cases. Sometimes the load marker button works fine to load saved markers. I have opened the cell counter files in Notepad to compare what is different between the ones that load properly and those that do not, and I have no clue what the difference is!!
Please help! I have upwards of 9 hours of quantification that I cannot access and am dreading the possibility of having to re-do all these counts