Cannot open Tiff Files with Fiji

Hello,

When opening attached image with ImageJ we get an error:

Unexpected image offset

However, opening it with the Bio-Formats Importer plugin works fine.

Cell_Cycle_00011082.tiff (473.1 KB)

Any ideas? @ctrueden

@Christian_Tischer ImageJ 1.x does not support TIFF files with out-of-order planes/IFDs. See https://imagej.net/TIFF#ImageJ_1.x_support

Workarounds include using Bio-Formats as you found, or going to Edit › Options › ImageJ2… and checking the “Use SCIFIO when opening files” option. See also https://imagej.net/SCIFIO

Unfortunately, there is no perfect option for TIFF. Either you get fast performance at the expense of correctness, or slow-but-correct behavior. Improving this is one of the most commonly requested things, but unfortunately there are no resources yet (at LOCI or MPI-CBG) to do it. Next year, hopefully. In the meantime, other groups are more than welcome to work on it.

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