Hey CellProfiler community,
I am working on histology images in CellProfiler and then in CellProfiler Analyst for classification purposes. Now I am looking to calculate the percentage of the image that is a certain color or falls within a certain range of colors and I would like the output of that in a percentage.
Is that task possible using this software or should I look somewhere else? I have put in a decent amount of time into CP and would like to keep using it but can’t get over this hump at the moment. The object I wish to quantify is too large and not in a uniform shape to use the primary and secondary object modulus. Any tips and tricks would be greatly appreciated!