I’m trying to create a scifio format and am unsure the best way to integrate it with ImageJ/Fiji. I tried searching this forum and the tutorial but thought it might be better to just ask.
I was thinking about using slices with the z axis, but is that possible with two images of different bitsize? Alternatively, I couldn’t get ImageJ to properly display the two images if I were to create two ImageMetadata objects and populate them. It seems to only open one image index. Is there a way of opening all the image indexes? We also tried an image sequence with two copies of the file, but ImageJ is only opening image index 0 twice still.
Here is the format we were working on for reference: https://github.com/steveand117/scifio/blob/8e17fd91f40347cdace955427e97fbb5ade63f83/src/main/java/io/scif/formats/PSIFormat.java
I’m very new to these libraries so any help or tidbits of knowledge including how ImageJ is making method calls or other functionality would be appreciated. Thanks!