I’m currently working with a project that involves the automatic identification of neurons in microscopic images of the nematode C.elegans like the one attached.
I was wondering if anybody here has worked with something similar and if it is possible for CellProfiler to do that identification automatically so that I can use that pipeline on every image similar to the one attached. I know that there is a module that allows the manual identification of objects but I’m not so sure about the automatic identifications of the objects I want, which are the Cellular Body and the Axon of the neuron.
Imgs_Celegans.rar (6.53 MB)
Thank you for your time.