Auto-threshold plugin download

Hi there!

I have been trying to download and use the auto-threshold.jar file for in FIJI and have been struggling with it for a couple days now… Here is what I have done so far.

  1. Tried to find auto-threshold under plugins in the FIJI application toolbar.
  2. Tried redownloading the Auto_Threshold-1.17.2.jar file into plugins and then searching for auto-threshold under plugins.
  3. Closing and reopening FIJI after downloading Auto_Threshold-1.17.2.jar into plugins then searching for auto-threshold under plugins.
  4. Deleting FIJI and redownloading FIJI which supposedly includes the plugin Auto_Threshold-1.17.2.jar.
  5. Repeated all of the above steps with the newly downloaded FIJI.
  6. Opened “Auto_Threshold-1.17.2.jar” with the imagej application.
  7. Searched everywhere through the toolbar for auto-threshold.

I have been doing all of this through a windows 64-bit download which is compatible with my computer. Does anyone have a similar issue and/or knows how to resolve this?

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Hi @gr374970,

when I enter “Auto th” in the search bar in Fiji, it tells me that this plugin lives in the menu Image > Adjust > Auto threshold.

Also note, there is no need to download or install anything except Fiji. This plugin is part of core Fiji.

Is this what you are looking for?



I think this is the one! Don’t know how I have been missing it. Thanks!

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