Analysis of pores size and distribution in honey comb like structure

Hello! I looking for plugin as well as image analysis suggestions here. I have SEM cross-section images of foams typically honeycomb like image in ideal case. I would like to analyze the pore size and their distribution stats throughout the image. Thanks in advance!

Hi @RKT

With an image we can help you.

Sure, thanks! foam crossection.tif (1.2 MB)

Hi
@RKT

Image difficult to treat.
We do not know how high we must delimit the pores.
You have to “play” with the filters.


A proposal :

//setTool("rectangle");
makeRectangle(0, 0, 1278, 892);
run("Crop");
run("Duplicate...", "title=1");
run("Duplicate...", "title=2");
run("Gaussian Blur...", "sigma=4");
setAutoThreshold("Percentile");
//run("Threshold...");

setOption("BlackBackground", true);
run("Convert to Mask");
run("Analyze Particles...", "display add");
selectWindow("1");
roiManager("Show All without labels");

Thank you very much for this! Just a follow up on this: the proposed codes you mentioned, is there a specific way to make image J take these codes. I’m more used to clicking the tabs and working. I’m sorry if my question sounds a bit stupid, I’m still new to this software.

Hi
@RKT

I do not understand your question.
If you want to save the code then you have to go:
plugin -> new->macro
( copy and paste)