i am getting started with Omero and CP and am trying to build a semi-automated pipeline.
i intend to store global key/value pairs for intensity maxima and minima (calculated using all files of a given wavelength) in Omero, and would like to use these values as inputs to certain CP modules. does CP’s Omero integration allow this?
i assume another way is to query the data from Omero myself on the command line and insert these values into the CP pipeline file (it’s all new to me)
thanks in advance for any tips!