Recently I want to use imageJ to process AFM images so I installled Fiji latest version and downloaded the Open_MI.java file as a plugin. Simultaneously, I installed JDK8 with JRE in my Win10. But first the problem was that I cannot compile this java file. The situation was very similar to the messages from the Topic of “Can’t run plugins” @mconfused, such as cannot find javac with some java:number,etc. So I adopted the way of moving java files out of the imageJ installation @ctrueden. There seems no above errors but I still cannot open AFM images from Bruker whatever I click the plugin of Open_Mi directly or through the “new-script- open_mi.java -compile and run” way. The procedure is: The message starts as “Open_MI not up-to-date because 1 source files are not up-to-date (C:\Users\XUEFEN~1\AppData\Local\Temp\java490694589260327820\src\main\java\Open_MI.java)…(too long!)” Please further refer to the information uploaded as two snap-shots.Then after I choose one AFM file( .hdr format?) and click open and imageJ shows it is running but waiting while there is no any result pop out i.e., seemingly there is nothing happened. I am not sure whether the issure is related to the above information and sorry for any unuseful information disturbing you!
Can anyone offer any solutions?