Usage & Issues


Topic Replies Views Activity
Instructions for creating an Update Site
update-site

We have been getting a few Update Site requests lately and along with them, many questions regarding the steps to create one. So I just wanted to make sure we have all that information in a single place. First off - cu…

2 71 September 17, 2020
About the Usage & Issues category
1 1623 November 5, 2020
CellProfiler 2.0 FAQ
cellprofiler ,  enhanceedges ,  combine ,  smooth ,  maskobjects ,  unmixcolors
21 20467 October 10, 2019
CellProfiler Analyst 2.0 FAQ
cellprofiler-analyst
4 1713 June 5, 2015
Developer Notes
cellprofiler
8 1605 February 27, 2010
CellProfiler 2.0 FAQ
cellprofiler
0 1103 January 20, 2010
Frames missing?
deeplabcut
1 22 December 3, 2020
Installation from source Mac
qupath
4 57 December 3, 2020
Running ImageJ and Big Stitcher on Cluster Threads Spawning Out of Control
imagej ,  big-stitcher
0 16 December 3, 2020
DeepCell - Tiling
qupath ,  deepcell
3 34 December 3, 2020
Trouble connecting to omero server with Python
omero ,  python ,  omero-server
7 49 December 3, 2020
BoneJ Analyse Particles File Size Limitation?
fiji ,  analyze-particles ,  bonej ,  imagej
14 179 December 3, 2020
Question on Training
deeplabcut
3 55 December 3, 2020
Help coding issues
python
1 36 December 2, 2020
Requests for creating ImageJ update sites
update-site ,  fiji ,  imagej
82 1480 December 2, 2020
Import mask from a 16-bit PNG file
qupath
3 31 December 2, 2020
Programmatically updating the persisted value for script parameters
fiji ,  scijava ,  script-parameters ,  prefservice
0 25 December 2, 2020
Failed to install the PluginsUpdater plugin for Windows
fiji
7 67 December 2, 2020
Bio-formats exposure time incorrect when importing VSI files
bio-formats
0 19 December 2, 2020
QuPath- pixel classification and CPU
cores-cpu ,  qupath ,  pixel-classifier
12 86 December 2, 2020
Positive cell detection, DAB detection, Cell expansion, Cell morphology, qupath
qupath
4 47 December 2, 2020
Using ImageJ to view and convert VSI files
plugin
2 1057 December 2, 2020
Opening qptiff file in CellProfiler
cellprofiler
3 47 December 2, 2020
Detecting bands by ImageJ on mac not fixed properly in each lane?
imagej
0 18 December 2, 2020
Could not create cudnn handle
deeplabcut
19 5582 December 2, 2020
Issue with ScieView black window
imagej ,  sciview
1 111 December 2, 2020
How to use UManager to control both cameras to collect data simultaneously
imagej ,  plugin
0 14 December 2, 2020
question for Image stitching method
imagej
0 14 December 2, 2020
VIV and AVIVATOR
ome-tiff
12 85 December 2, 2020
Export masks as grid tiles?
segmentation ,  qupath
7 125 December 1, 2020