Usage & Issues


Topic Replies Views Activity
Developer Notes
cellprofiler
9 1702 March 22, 2021
Instructions for creating an Update Site
update-site

We have been getting a few Update Site requests lately and along with them, many questions regarding the steps to create one. So I just wanted to make sure we have all that information in a single place. First off - cu…

2 146 September 17, 2020
About the Usage & Issues category
1 1787 November 5, 2020
CellProfiler 2.0 FAQ
cellprofiler ,  enhanceedges ,  combine ,  smooth ,  maskobjects ,  unmixcolors
21 21612 October 10, 2019
CellProfiler Analyst 2.0 FAQ
cellprofiler-analyst
4 1775 June 5, 2015
CellProfiler 2.0 FAQ
cellprofiler
0 1153 January 20, 2010
SpinnakerCamera.dll causing Hardware Configuration Wizard to crash
micro-manager
3 50 April 22, 2021
How can I make a shifted duplicate of a ROI?
fiji ,  roi-manager ,  imagej ,  roi
0 9 April 22, 2021
Resaving xlef file creates non-functional lif/tif file
bio-formats ,  qupath
6 66 April 22, 2021
"Could not roll back JDBC transaction"
omero
2 37 April 22, 2021
Adjusting/preparing In/Out folder while creating the pipeline for batch-processing
cellprofiler ,  batch-processing
0 13 April 22, 2021
Converting scn files to 16-bit/unsigned 8-bit integers OME-TIFF files for usage in Minerva Browser
omero ,  qupath ,  libvips ,  minerva-browser
1 22 April 22, 2021
DeepLabCut 2.1.10 compatibility with python 3.7, tensorflow 2.1, CUDA 10.1
deeplabcut
0 13 April 22, 2021
SNT - Sholl analysis - how to store data from multiple sholl analyses in the same image?
neuroanatomy ,  plugin ,  sholl-analysis ,  snt
1 38 April 22, 2021
Event emitter for deleting data within a layer (points, shapes, etc.)
napari
0 15 April 22, 2021
Exporting ROI coordinates from KNIME
knime ,  imagej
5 72 April 22, 2021
Lots of crashes/BSOD on windows 7
micro-manager
1 29 April 22, 2021
Taking Values Directly From Results Table Pyimagej
imagej ,  python ,  pyimagej
0 14 April 22, 2021
StarDist_Tensorflow error
qupath
2 46 April 22, 2021
Are your websites down ...?
ome ,  omero ,  outage
4 71 April 22, 2021
Community made tutorials and project walkthroughs
deeplabcut
4 114 April 22, 2021
PSF Distillation, Depth-Dependent PSFs and PSF Mowdels
svi-huygens
0 29 April 21, 2021
How to save a DICOM image with a drawn ROI as a TIFF image?
roi
0 21 April 22, 2021
Get ImageID after upload to OMERO in an Imagej python script
omero ,  python
0 26 April 22, 2021
Getting started with OMERO and LDAP
omero ,  omero-server ,  ldap
24 312 April 22, 2021
Basler acA-2040-90um micro-manager compatibiliity
micro-manager
1 38 April 22, 2021
Omero-iviewer can't display more then 500 ROIS
omero ,  omero-figure ,  omero-iviewer
5 276 April 22, 2021
Can't open .czi stacks
icy
4 58 April 22, 2021
3D correlation using ec-clem
ec-clem
0 23 April 22, 2021
Issues opening large .czi files
fiji ,  bio-formats
4 69 April 22, 2021