Welcome to the Image.sc Forum! [Announcements] (2)

Welcome to the Scientific Community Image Forum at forum.image.sc! This forum’s focus is software-oriented aspects of scientific imaging, particularly (but not limited to) image analysis, processing, acquisition, storag…

Trakem2: Align layers manually with landmarks doesn't work [Image Analysis] (8)
Renaming one word in image name ( 2 ) [Image Analysis] (24)
Publishing Scripts in Journals [Image Analysis] (3)
Odd second moment of area and zpol values [Image Analysis] (1)
Console application doesn't exit [Usage & Issues] (8)
ImagePlus display swaps channels and frames [Usage & Issues] (7)
Local Thickness for 3D image but results for 2D slice [Usage & Issues] (16)
Creating macro that calculates and adjusts threshold for each image [Development] (2)
Individual object masks [Usage & Issues] (7)
Automatic Micrograph Analyser (my macro) [Development] (6)
Errors in ExportToSpreasheet [Usage & Issues] (3)
Bio-Formats ome-tiff write time issue / bug? [Usage & Issues] (7)
Drosophila_NMJ_Morphometrics and Boutons - Macros Plugin question [Usage & Issues] (3)
Accessing Image After Z-Spacing Correction Plugin [Usage & Issues] (2)
High throughput cell-based assay Research Scientist (BS or MS) at NIBR [Job Opportunities] (1)
Ilastik headless -- userdefined subdivision of 3D image volume in pixel classification [Usage & Issues] (12)
Automatic length measurement of metal parts [Image Analysis] (18)
Unable to run any commands in --headless mode [Usage & Issues] (3)
Show Number of Annotated Pixels [Usage & Issues] (2)
How to incorporate ilastik results into cellprofiler pipeline? [Image Analysis] (4)
Use TrainableSegmentation with python [Image Analysis] (2)
Limit to threshold excluding on edges (no analyse particles) [Image Analysis] (2)
Circular dependency of jars [Development] (16)
Quantification and pattern recognition of necrosis [Image Analysis] (5)
Weka trainer 3d error uncertainty [Usage & Issues] (1)
Spot intensity analysis plugin not generating spot intensity profile [Image Analysis] (6)
Saving to the desktop as a default [Development] (16)
Code snippet to load an image, perform segmentation and output total, positive and negative counts [Development] (2)
Trackmate edit objects after tracking [Image Analysis] (2)