Welcome to the Image.sc Forum! [Announcements] (2)

Welcome to the Scientific Community Image Forum at forum.image.sc! This forum’s focus is software-oriented aspects of scientific imaging, particularly (but not limited to) image analysis, processing, acquisition, storag…

Console application doesn't exit [Usage & Issues] (2)
Unable to run any commands in --headless mode [Usage & Issues] (3)
Show Number of Annotated Pixels [Usage & Issues] (2)
How to incorporate ilastik results into cellprofiler pipeline? [Image Analysis] (4)
Use TrainableSegmentation with python [Image Analysis] (2)
Automatic Micrograph Analyser (my macro) [Development] (3)
Limit to threshold excluding on edges (no analyse particles) [Image Analysis] (2)
Circular dependency of jars [Development] (16)
Renaming one word in image name [Image Analysis] (4)
Quantification and pattern recognition of necrosis [Image Analysis] (5)
Weka trainer 3d error uncertainty [Usage & Issues] (1)
Automatic lenght measurement of metal parts [Image Analysis] (17)
Spot intensity analysis plugin not generating spot intensity profile [Image Analysis] (6)
Accessing Image After Z-Spacing Correction Plugin [Usage & Issues] (1)
Errors in ExportToSpreasheet [Usage & Issues] (2)
Saving to the desktop as a default [Development] (16)
Individual object masks [Usage & Issues] (6)
Code snippet to load an image, perform segmentation and output total, positive and negative counts [Development] (2)
Trackmate edit objects after tracking [Image Analysis] (2)
Cannont coverted to multi-channel composit image automatically after size adjusted [Image Analysis] (2)
Adjust font size for Jython Interpreter and other scripting interpreters [Usage & Issues] (1)
Help button with script parameters [Development] (1)
Jython plugin crashed on global variables [Usage & Issues] (8)
Action Tool Icons in FIJI [Development] (3)
JPEG2000 images with Cellprofiler docker latest/3.0.0 [Usage & Issues] (4)
Measurement of shortest distance between edges [Image Analysis] (11)
Analyze paired images (GFP & DIC) of yeast cells [Image Analysis] (6)
Paint ground-truth mask on image (without training a classifier) [Image Analysis] (10)
Trakem2: Align layers manually with landmarks doesn't work [Image Analysis] (7)