Welcome to the Image.sc Forum! [Announcements] (2)

Welcome to the Scientific Community Image Forum at forum.image.sc! This forum’s focus is software-oriented aspects of scientific imaging, particularly (but not limited to) image analysis, processing, acquisition, storag…

setResult is blank [Image Analysis] (2)
Quantify flower color, redness, yellowness, [Image Analysis] (5)
Compatability issue between CellProfiler 3.1 and FIJI [Usage & Issues] (5)
Separating objects based on shape/size to do individual analysis [Image Analysis] (4)
Creating a GUI with ImageJ components [Development] (3)
How to Batch process Sholl Analysis (Tracings) [Image Analysis] (9)
Automating drawing + measuring lines based on colour change [Image Analysis] (2)
Cell Painting: Establishing the platform [Image Analysis] (6)
Trainable Weka Error (large images) [Usage & Issues] (9)
ERROR: Multichannel image required [Usage & Issues] (3)
Automated batch processing [Development] (15)
Automating "XOR" analysis of dilated and eroded images [Image Analysis] (1)
FIJI-trouble with kymoanalyzer macro - 3. Cargo Population [Image Analysis] (2)
Line structuring element with ImgLib2 [Development] (3)
Create full image out of µCT-scans [Image Analysis] (6)
How to run the GrayscaleAttributeFilteringPlugin of MorphoLibJ in a python macro [Image Analysis] (3)
Using FIJI plugin in MATLAB? [Usage & Issues] (2)
Why I'm using Miji instead of ImageJ-Matlab ( 2 ) [Usage & Issues] (22)
Show labels in different color [Image Analysis] (9)
Analysis with ImageJ and Visualization in the Jupyter Notebook ( 2 3 ) [Image Analysis] (51)
MakeProjection and IdentifyPrimaryObjects in one pipeline [Image Analysis] (2)
Big Data Viewer xml - affine transform [Development] (4)
Ratiometric z stack [Image Analysis] (13)
Ridge Detection [Image Analysis] (9)
Applying a "warp mask" to multiple images [Image Analysis] (4)
Image Registration / neuron overlap help [Image Analysis] (1)
Measuring Axons and Ignoring Artifcats [Image Analysis] (2)
Crash after 'Undo' in freehand Edit Objects Manually [Usage & Issues] (1)
Save individual cropped cells as image [Image Analysis] (7)