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There are several other community forums whose topics overlap with this one: Microforum’s focus is hardware, acquisition, and specimen-related aspects of scientific imaging, particularly (but not limited to) theory a…

2 9192 February 10, 2020
Welcome to the Image.sc Forum!
Announcements

Welcome to the Scientific Community Image Forum at forum.image.sc! This forum’s focus is software-oriented aspects of scientific imaging, particularly (but not limited to) image analysis, processing, acquisition, storag…

4 8586 April 29, 2020
Update in OMERO Split View option?
Usage & Issues
omero
0 1 June 14, 2021
Libvips 8.11 is out, and adds support for ome-tiff with jpeg2000 compression
Announcements
ome-tiff ,  jpeg2000 ,  libvips
1 89 June 14, 2021
Grain analysis with no boundaries
Image Analysis
imagej ,  segmentation
0 4 June 14, 2021
"OMERO for admins" regular meeting
Announcements
omero
4 116 June 14, 2021
Fiji Hackathon 2021: big data days (A)
Announcements
bigdata ,  ome-ngff ,  file-formats
1 57 June 14, 2021
New tool, Colorblind Bar
Announcements
fiji ,  imagej ,  macro ,  colorblind
12 614 June 14, 2021
Keypoints_only cannot draw skeleton in create_labeled_video
Usage & Issues
deeplabcut
4 61 June 14, 2021
Supply .msi with .exe releases
Development
ilastik
2 43 June 14, 2021
Moving 2D image stack from HK Means to Spot Tracking
Image Analysis
icy ,  tracking
7 123 June 14, 2021
BigDataProcessor
Usage & Issues
imagej ,  bigdataprocessor ,  bigdataprocessor2
59 1178 June 14, 2021
GPU for DeepLabcut
Usage & Issues
deeplabcut
9 37 June 14, 2021
SNT hide trace projection
Usage & Issues
fiji ,  imagej ,  neuroanatomy ,  snt
4 64 June 14, 2021
The active image does not have a selection - problem with macro
Image Analysis
imagej
2 53 June 14, 2021
Problem with Interactive 3D Surface Plot Fiji
Development
fiji ,  imagej ,  macro
0 16 June 14, 2021
Problem with ClearVolume and 3D Viewer related to gluegen-rt.dll
Usage & Issues
fiji ,  clearvolume ,  java3d ,  java
0 14 June 14, 2021
How to terminate a worker in thread_worker in napari?
Usage & Issues
napari
7 79 June 14, 2021
Unidentified identifier error
Usage & Issues
fiji ,  imagej ,  macro ,  scripting
1 24 June 14, 2021
Aligning two Z-stacks after concatenation / Export TrakEm2 file as TIF
Image Analysis
fiji ,  trakem2 ,  stack ,  align ,  z-stack
1 28 June 14, 2021
How to group wells according to treatment conditions?
Image Analysis
groups ,  cpa ,  cellprofiler-analyst
2 710 June 14, 2021
Calling ParticleAnalyzer API in headless mode (with the same image and parameters) returns different results than "Analyze Particles..."
Usage & Issues
maven ,  analyze-particles ,  imagej ,  plugin ,  java
5 107 June 13, 2021
Triggerscope DA backwards compatibility
Usage & Issues
micro-manager
0 20 June 13, 2021
CellProfiler Pipeline compatibility issues
Usage & Issues
cellprofiler
7 168 June 13, 2021
Seeking ImageJ ROI manager macro script advice
Image Analysis
fiji ,  imagej ,  roi
3 74 June 13, 2021
Move a multiple selection
Usage & Issues
selection
5 86 June 13, 2021
Toolbar blocked by text area
Usage & Issues
imagej
5 206 June 13, 2021
Support for .mrxs files + best walkarounds?
Usage & Issues
qupath
6 136 June 13, 2021
"Format error" when uploading Hamamatsu ndpi WSIs > 6 GB
Usage & Issues
cytomine
0 28 June 13, 2021
Saving images in micromanager using scripts
Usage & Issues
micro-manager
0 27 June 13, 2021