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There are several other community forums whose topics overlap with this one: Microforum’s focus is hardware, acquisition, and specimen-related aspects of scientific imaging, particularly (but not limited to) theory a…

3 4091 February 10, 2020
Welcome to the Image.sc Forum!
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Welcome to the Scientific Community Image Forum at forum.image.sc! This forum’s focus is software-oriented aspects of scientific imaging, particularly (but not limited to) image analysis, processing, acquisition, storag…

5 6191 April 29, 2020
Setting the scale bar
Image Analysis
fiji ,  imagej ,  scale ,  image ,  set-scale
1 1 September 22, 2020
How to apply Kalman Filter to the unfiltered results by DeepLabCut?
Image Analysis
object-tracking ,  tracking ,  deeplabcut ,  kalman-filter ,  pose-estimation
1 7 September 22, 2020
Adding geometrical constraints to deeplabcut for pose estimation
Image Analysis
deep-learning ,  deeplabcut ,  geometry ,  computer-vision
1 7 September 22, 2020
Using my own network instead of ResNet or MobileNet in DeepLabCut
Image Analysis
deeplabcut
1 7 September 22, 2020
ROI Save Overwriting Old ROIs
Image Analysis
imagej
11 54 September 22, 2020
Using Ellipsoid Factor in a Macro
Usage & Issues
bonej ,  macro
3 89 September 22, 2020
Is there an easy way to select a window who name ends with a particular name?
Image Analysis
fiji ,  imagej ,  macro
2 24 September 21, 2020
Trainable WEKA settings for Xylem Analysis
Image Analysis
fiji ,  imagej ,  trainable-weka
1 14 September 21, 2020
CellProfiler 3.1.8 won't open on MacOS
Usage & Issues
cellprofiler
9 598 September 21, 2020
Saved .csv file is 0kb in Qupath v.0.1.3
Usage & Issues
qupath
1 12 September 21, 2020
OME Files 0.6.0 on Windows 10
Development
ome-files
9 121 September 21, 2020
Plot profile area selection
Image Analysis
fiji ,  imagej
11 89 September 21, 2020
Import labeled tiles into qupath
Image Analysis
qupath
1 15 September 21, 2020
Icy Protocol Version Control
Usage & Issues
icy
1 15 September 21, 2020
Omero.web Django version
Usage & Issues
python
2 17 September 21, 2020
CLIJ deconvolution
Image Analysis
fiji ,  imagej ,  plugin ,  clij
72 1464 September 21, 2020
How to measure the length,angle,width,interspacing between particles automatically?
Image Analysis
fiji ,  segmentation ,  directionality ,  image-j
2 40 September 18, 2020
Image magnification and tiling
Image Analysis
qupath
4 54 September 21, 2020
Help using CellProfiler to analyze 3D image stack
Image Analysis
cellprofiler
1 18 September 21, 2020
"Fresh start" macro command in ImageJ / Fiji
Usage & Issues
fiji ,  imagej ,  macro
3 43 September 21, 2020
How can I sort images in the image list in QuPath?
Image Analysis
qupath
5 51 September 21, 2020
Clij2 not using the GPU
Usage & Issues
clij
2 21 September 21, 2020
Export annotations in parallel (AI -> Export training regions functionality in groovy)
Development
python ,  qupath
2 29 September 21, 2020
Windows installation failed due to error in installing build dependencies
Usage & Issues
napari
2 30 September 21, 2020
3D Shape plugin
Image Analysis
imagej
10 896 September 21, 2020
In CellProfiler 4 intensity measurements are not available for export in ExportToSpreadsheet
Usage & Issues
cellprofiler
3 29 September 21, 2020
Skeleton Builder not finding fully labeled animal
Usage & Issues
deeplabcut
5 61 September 21, 2020
ImarisWriter open source library for storage of large images in blockwise multi-resolution format
Announcements
open-source ,  imaris
11 309 September 21, 2020