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There are several other community forums whose topics overlap with this one: Microforum’s focus is hardware, acquisition, and specimen-related aspects of scientific imaging, particularly (but not limited to) theory a…

2 8246 February 10, 2020
Welcome to the Image.sc Forum!
Announcements

Welcome to the Scientific Community Image Forum at forum.image.sc! This forum’s focus is software-oriented aspects of scientific imaging, particularly (but not limited to) image analysis, processing, acquisition, storag…

4 8132 April 29, 2020
Specifying number of superpixels in an object
Image Analysis
scikit-image
11 137 April 21, 2021
How to automatically measure transparent particle diameter with ImageJ?
Image Analysis
fiji ,  imagej ,  plugin ,  macro ,  imagej-macro
3 39 April 21, 2021
OMERO.openlink: Sharing data externally and enabling download of large data via web
Announcements
omero ,  omero-web
13 360 April 21, 2021
Getting started with OMERO and LDAP
Usage & Issues
omero ,  omero-server ,  ldap
23 279 April 21, 2021
3D point cloud with changing color in time
Usage & Issues
napari
14 155 April 21, 2021
Getting Fiji ImageJ to work with GUI on ARM devices
Usage & Issues
fiji ,  imagej
0 13 April 21, 2021
OrientationJ or similar for Python
Image Analysis
imagej ,  python ,  orientationj
0 11 April 21, 2021
How can i classify images(cells) based on its fluorescence intensity in cytoplasm?
Image Analysis
cellprofiler ,  segmentation ,  cellprofiler-analyst
3 61 April 20, 2021
Crop roi from czi file and downscale - all in python
Image Analysis
python ,  czi
0 14 April 21, 2021
Visualizing feature measurements in napari using colormaps as LUTs
Development
napari
9 165 April 21, 2021
PixelData threads and pyramid generation issues
Usage & Issues
omero ,  omero-server
17 307 April 21, 2021
Image import error using NFS mount to OMERO server container
Usage & Issues
omero ,  aws
14 265 April 21, 2021
Is Deeplabcut compatible with Nvidia Geforce 920m?
Usage & Issues
deeplabcut
1 38 April 21, 2021
ImageJ legacy injector error when running Tests
Usage & Issues
imagej2
3 67 April 20, 2021
Separated OMERO web-servers for private and public users
Development
omero ,  omero-web ,  omero-web-publish
0 25 April 21, 2021
CLIJ_label map to ROI fast version
Development
clij ,  clij2
23 226 April 21, 2021
How to sum Leaf Area Values?
Image Analysis
imagej
4 70 April 21, 2021
Can't open .czi stacks
Usage & Issues
icy
1 28 April 21, 2021
Failing to start up server and issues with 4064
Usage & Issues
omero
1 43 April 21, 2021
Image registration in Python
Image Analysis
python ,  opencv ,  scikit-image
4 48 April 21, 2021
Issues opening large .czi files
Usage & Issues
fiji ,  bio-formats
0 26 April 21, 2021
Identifying Lysosomes
Image Analysis
cellprofiler
2 61 April 21, 2021
Micro-manager: Intermittent 'Failed to load hardware configuration' error
Usage & Issues
micro-manager
0 17 April 21, 2021
Cellpose parameter optimisation
Image Analysis
cellpose
1 47 April 21, 2021
Issues with IdentifyObjectsManually Module
Image Analysis
cellprofiler
0 17 April 21, 2021
CODEX StarDist segmentation
Image Analysis
imagej ,  qupath ,  stardist
3 96 April 21, 2021
Entering angle value by determining the starting point
Image Analysis
imagej
1 43 April 21, 2021
Stain vector for TMA analysis
Image Analysis
qupath
1 34 April 21, 2021