Image.sc Forum

Topic	Replies	Views	Activity
Related Communities Websites There are several other community forums whose topics overlap with this one: Microforum’s focus is hardware, acquisition, and specimen-related aspects of scientific imaging, particularly (but not limited to) theory …	2	29640	February 10, 2020
Welcome to the Image.sc Forum! Announcements Welcome to the Scientific Community Image Forum at forum.image.sc! This forum’s focus is software-oriented aspects of scientific imaging, particularly (but not limited to) image analysis, processing, acquisition, storag…	4	18465	April 29, 2020
Finetuning vs training from scratch Development micro-sam	4	23	January 12, 2025
.dm3 from TEM - multiple magnifications - canvas with scaled images for comparison? Usage & Issues fiji , imagej	2	15	January 12, 2025
Problems with double positive cell detection in quPath Image Analysis qupath	11	98	January 12, 2025
Fluorescence WSI Processing Issue: Handling Multiple Background Colors and Large ROI Areas Image Analysis qupath	3	14	January 12, 2025
QuPath: How to Handle Class Imbalance in Object Classifier for H&E Immune Cell Detection? Image Analysis qupath	0	7	January 12, 2025
DeepSlice Web Error Image Analysis fiji , qupath , abba , deepslice	5	46	January 12, 2025
ImageJ macro displays threshold window to user, how to change that? Development imagej , plugin , batch-processing , macro	7	29	January 12, 2025
Measure skeleton paths from root to leaves Image Analysis fiji , plugin , scripting	8	51	January 12, 2025
Zarr-Python 3 is here! Announcements ome-ngff , zarr , ome-zarr	2	94	January 12, 2025
Quantification of Calcium oscillations on 48hpf zebrafish embryos Cadual Vein Plexus with Fiji Image Analysis fiji	11	50	January 12, 2025
I would like to control the IX83 using its SDK in python Development python	1	11	January 12, 2025
Toggle objects visibility Development macro	6	19	January 12, 2025
Find correct thresholding to extract crystals area Image Analysis imagej	10	38	January 11, 2025
Incorrect voxel size after resampling Usage & Issues fiji , imagej	5	20	January 11, 2025
Steinbock Software: Issue with Empty Folders and Excel Panel Recognition Usage & Issues segmentation	8	20	January 11, 2025
RPE cell boundary tracing Image Analysis cellprofiler , imagej	2	25	January 11, 2025
Exporting images with original MetaData Image Analysis export , qupath , warpy , imagecombiner	1	14	January 11, 2025
Biovoxxel object inspector which runs batch of images Image Analysis bio-formats , imagej , biovoxxel , cellpose	1	17	January 11, 2025
Output of LabKit/ Use of probability maps Image Analysis weka , imagej , segmentation , labkit	8	38	January 11, 2025
Andor zyla 5.5 scmos, Image Analysis micro-manager	7	31	January 11, 2025
Micromanager and Andor Zyla Image Analysis micro-manager	3	23	January 11, 2025
DeepImageJ macro not working with active image Usage & Issues fiji , imagej , plugin , macro , deepimagej , pytorch	17	95	January 11, 2025
Nicer and faster conversion to pyramidal OME-TIFF files: Major Kheops update Announcements fiji , ome-tiff , pyramid , conversion	8	1315	January 11, 2025
Finding the number of nucli with puncta on Cellprofiler Image Analysis cellprofiler	2	11	January 11, 2025
Exporting intensity features from QuPATH Image Analysis qupath	7	53	January 11, 2025
Exporting annotated masks together with their respective images in binary format from Qpath Image Analysis qupath	5	27	January 11, 2025
Compilation problems Usage & Issues fiji , imagej	14	2357	January 10, 2025
Ngff_zarr package multiscales and channel support Image Analysis ome-ngff , ome-zarr	5	144	January 10, 2025