Welcome to the Image.sc Forum! [Announcements] (2)

Welcome to the Scientific Community Image Forum at forum.image.sc! This forum’s focus is software-oriented aspects of scientific imaging, particularly (but not limited to) image analysis, processing, acquisition, storag…

Crop according to pre-made outline [Image Analysis] (8)
Enhancing grain boundaries [Image Analysis] (1)
How to call and run ilastik from python? ( 2 ) [Development] (23)
Time Sensitive Issue! Following error when trying to fetch positive or negative images using Classifier option on CPA [Usage & Issues] (1)
Accumulation of threads when classifying many images [Usage & Issues] (3)
ImageJ Help: 3GP Video [Usage & Issues] (2)
Measure Image Area Occupied output in CellProfiler [Image Analysis] (2)
Speckle Pipeline: Area of h2ax foci [Usage & Issues] (2)
How many 2D slices do I need to train classifier for 3D Trainable WEKA Segmentation? [Image Analysis] (10)
Report Bug 'Flatten' Fuction of the ROI manager [Usage & Issues] (4)
T-SPIM (dual axis illumination) acquisition options [Usage & Issues] (2)
Displaying and using and any Object in a Scijava/FIJI Command [Usage & Issues] (1)
TrackMate Scripting Examples for ImageJ 2 [Usage & Issues] (3)
SPIM alignment using multiple wavelengths [Usage & Issues] (4)
I need to find out what is the pore size of this image [Image Analysis] (18)
Trackmate with bright field [Image Analysis] (7)
Calculating localization of protein with very different distributions [Image Analysis] (2)
Joint Projection and Denoising in CARE [Usage & Issues] (2)
Maven code formatting plugin for ImageJ / SciJava / Imglib2 git projects [Development] (2)
Data Scientist for Image and Data Core Facility at DZNE in Bonn/Germany [Job Opportunities] (1)
Applying Affine Matrix Result from 2D/3D Registration to Images [Image Analysis] (10)
How to crop images nuclei automaticaly [Image Analysis] (8)
Ho to created squares sections into the cell to measure the fluorescence signal [Image Analysis] (7)
Different number of frames and number of results [Image Analysis] (1)
MatLab expert wanted [Image Analysis] (3)
ImageJ 3D viewer appearing as 2D stacks when rotating [Image Analysis] (3)
Memory leak with Bioformats in Matlab (tested on 5.9.2) [Usage & Issues] (16)
"Save XY Coordinates" for multiple ROIs? [Image Analysis] (6)
Fiji Photo Monitoring plugin - Recommended Color Table [Image Analysis] (1)